Projects > Pathological Lung Segmentation  

Multi-stage Learning for Robust Lung Segmentation in Challenging CT Volumes

Abstract

Simple algorithms for segmenting healthy lung parenchyma in CT are unable to deal with high density tissue common in pulmonary diseases. To overcome this problem, we propose a multi-stage learning-based approach that combines anatomical information to predict an initialization of a statistical shape model of the lungs. The initialization first detects the carina of the trachea, and uses this to detect a set of automatically selected stable landmarks on regions near the lung (e.g., ribs, spine). These landmarks are used to align the shape model, which is then refined through boundary detection to obtain fine-grained segmentation. Robustness is obtained through hierarchical use of discriminative classifiers that are trained on a range of manually annotated data of diseased and healthy lungs. We demonstrate fast detection (35s per volume on average) and segmentation of 2 mm accuracy on challenging data.

Results

Figure 1: Comparison of some results without stable landmarks (left column of every set) and with stable landmark detection (right column of every set).

Segmentation 1 without Segmentation 1 with Segmentation 4 without Segmentation 4 with
Segmentation 2 without Segmentation 2 with Segmentation 5 without Segmentation 5 with
Segmentation 3 without Segmentation 3 with Segmentation 6 without Segmentation 6 with

Publications and Further Reading

Multi-stage Learning for Robust Lung Segmentation in Challenging CT Volumes
Michal Sofka, Jens Wetzl, Neil Birkbeck, Jingdan Zhang, Timo Kohlberger, Jens Kaftan, Jérôme Declerck, and S.Kevin Zhou
In Proceedings of the International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), Toronto, Canada, 18-22 Sep. 2011.
[pdf] [bibtex]

Robust segmentation of challenging lungs in CT using multi-stage learning and level set optimization
Neil Birkbeck, Michal Sofka, Timo Kohlberger, Jingdan Zhang, Jens Wetzl, Jens Kaftan, and S. Kevin Zhou
In Suzuki Kenji, editor, Computational Intelligence in Biomedical Imaging. Springer New York, 2014. pp 185-208.
[pdf] [bibtex] [publisher]



 

Copyright 2017 Michal Sofka